We recently published a first story on combining spatial and single cell transcriptomics in barley (see here: www.nature.com/articles/s41...) Lets go for the next level now, i.e. understanding gene networks and barley meristem development in 4D!
Imputation integrates single-cell and spatial gene expression data to resolve transcriptional networks in barley shoot meristem development - Nature PlantsSpatially resolved gene expression during barley development was done by integrating an scRNA-seq dataset from cells with unknown position with spatial transcriptomics. This dataset is publicly availa...www.nature.com